| 2006-12-26 | NorthamptonvCheltenhamLeague One · England | 2–0 | League One · England |
| 2006-12-23 | OldhamvNorthamptonLeague One · England | 3–0 | League One · England |
| 2006-12-19 | NorthamptonvLeyton OrientLeague One · England | 0–1 | League One · England |
| 2006-12-16 | HuddersfieldvNorthamptonLeague One · England | 1–1 | League One · England |
| 2006-12-09 | NorthamptonvDoncasterLeague One · England | 0–2 | League One · England |
| 2006-12-06 | ChesterfieldvNorthamptonLeague One · England | 0–0 | League One · England |
| 2006-11-18 | ScunthorpevNorthamptonLeague One · England | 1–0 | League One · England |
| 2006-11-04 | NorthamptonvBlackpoolLeague One · England | 1–1 | League One · England |
| 2006-10-28 | NorthamptonvSwanseaLeague One · England | 1–0 | League One · England |
| 2006-10-21 | BrightonvNorthamptonLeague One · England | 1–1 | League One · England |
| 2006-10-13 | NorthamptonvBradfordLeague One · England | 0–0 | League One · England |
| 2006-10-06 | BournemouthvNorthamptonLeague One · England | 0–0 | League One · England |
| 2006-09-30 | NorthamptonvPort ValeLeague One · England | 0–2 | League One · England |
| 2006-09-26 | CheltenhamvNorthamptonLeague One · England | 0–2 | League One · England |
| 2006-09-23 | MillwallvNorthamptonLeague One · England | 0–1 | League One · England |
| 2006-09-16 | NorthamptonvTranmereLeague One · England | 1–3 | League One · England |
| 2006-09-12 | NorthamptonvYeovilLeague One · England | 1–1 | League One · England |
| 2006-09-09 | CarlislevNorthamptonLeague One · England | 1–1 | League One · England |
| 2006-09-01 | RotherhamvNorthamptonLeague One · England | 1–2 | League One · England |
| 2006-08-29 | NorthamptonvBristol CityLeague One · England | 1–3 | League One · England |
| 2006-08-19 | GillinghamvNorthamptonLeague One · England | 0–1 | League One · England |
| 2006-08-12 | NorthamptonvNott'm ForestLeague One · England | 0–1 | League One · England |
| 2006-08-08 | NorthamptonvBrentfordLeague One · England | 0–1 | League One · England |
| 2006-08-05 | CrewevNorthamptonLeague One · England | 2–2 | League One · England |
| 2006-05-06 | GrimsbyvNorthamptonLeague Two · England | 1–1 | League Two · England |
| 2006-04-29 | NorthamptonvChesterLeague Two · England | 1–0 | League Two · England |
| 2006-04-22 | OxfordvNorthamptonLeague Two · England | 1–3 | League Two · England |
| 2006-04-17 | NorthamptonvStockportLeague Two · England | 2–0 | League Two · England |
| 2006-04-15 | DarlingtonvNorthamptonLeague Two · England | 0–1 | League Two · England |
| 2006-04-08 | NorthamptonvRochdaleLeague Two · England | 2–2 | League Two · England |
| 2006-04-01 | PeterborovNorthamptonLeague Two · England | 0–1 | League Two · England |
| 2006-03-25 | NorthamptonvNotts CountyLeague Two · England | 2–0 | League Two · England |
| 2006-03-22 | BostonvNorthamptonLeague Two · England | 0–1 | League Two · England |
| 2006-03-18 | MansfieldvNorthamptonLeague Two · England | 1–0 | League Two · England |
| 2006-03-10 | NorthamptonvCarlisleLeague Two · England | 0–3 | League Two · England |
| 2006-02-25 | WrexhamvNorthamptonLeague Two · England | 0–1 | League Two · England |
| 2006-02-17 | NorthamptonvTorquayLeague Two · England | 1–0 | League Two · England |
| 2006-02-14 | NorthamptonvLeyton OrientLeague Two · England | 1–1 | League Two · England |
| 2006-02-11 | CheltenhamvNorthamptonLeague Two · England | 3–1 | League Two · England |
| 2006-02-04 | NorthamptonvRushden & DLeague Two · England | 2–0 | League Two · England |
| 2006-01-31 | NorthamptonvWycombeLeague Two · England | 0–0 | League Two · England |
| 2006-01-28 | BuryvNorthamptonLeague Two · England | 0–2 | League Two · England |
| 2006-01-24 | Notts CountyvNorthamptonLeague Two · England | 2–2 | League Two · England |
| 2006-01-21 | NorthamptonvMacclesfieldLeague Two · England | 5–0 | League Two · England |
| 2006-01-14 | Leyton OrientvNorthamptonLeague Two · England | 1–2 | League Two · England |
| 2006-01-02 | RochdalevNorthamptonLeague Two · England | 1–1 | League Two · England |