| 2016-10-23 | Sporting Kansas CityvSan Jose EarthquakesMLS · United States | 2–0 | MLS · United States |
| 2016-10-16 | San Jose EarthquakesvVancouver WhitecapsMLS · United States | 0–0 | MLS · United States |
| 2016-10-14 | Colorado RapidsvSan Jose EarthquakesMLS · United States | 2–1 | MLS · United States |
| 2016-10-02 | San Jose EarthquakesvReal Salt LakeMLS · United States | 2–1 | MLS · United States |
| 2016-09-29 | CF MontrealvSan Jose EarthquakesMLS · United States | 3–1 | MLS · United States |
| 2016-09-25 | San Jose EarthquakesvSporting Kansas CityMLS · United States | 1–2 | MLS · United States |
| 2016-09-18 | Colorado RapidsvSan Jose EarthquakesMLS · United States | 0–0 | MLS · United States |
| 2016-09-11 | San Jose EarthquakesvSeattle SoundersMLS · United States | 1–1 | MLS · United States |
| 2016-08-28 | Columbus CrewvSan Jose EarthquakesMLS · United States | 2–0 | MLS · United States |
| 2016-08-25 | San Jose EarthquakesvNew England RevolutionMLS · United States | 0–0 | MLS · United States |
| 2016-08-20 | San Jose EarthquakesvHouston DynamoMLS · United States | 1–2 | MLS · United States |
| 2016-08-13 | Vancouver WhitecapsvSan Jose EarthquakesMLS · United States | 1–2 | MLS · United States |
| 2016-08-06 | San Jose EarthquakesvNew York CityMLS · United States | 0–0 | MLS · United States |
| 2016-08-01 | Houston DynamovSan Jose EarthquakesMLS · United States | 1–1 | MLS · United States |
| 2016-07-23 | Real Salt LakevSan Jose EarthquakesMLS · United States | 1–1 | MLS · United States |
| 2016-07-17 | San Jose EarthquakesvToronto FCMLS · United States | 2–1 | MLS · United States |
| 2016-07-09 | San Jose EarthquakesvFC DallasMLS · United States | 0–1 | MLS · United States |
| 2016-07-02 | Chicago FirevSan Jose EarthquakesMLS · United States | 1–0 | MLS · United States |
| 2016-06-26 | San Jose EarthquakesvLos Angeles GalaxyMLS · United States | 1–1 | MLS · United States |
| 2016-06-19 | Orlando CityvSan Jose EarthquakesMLS · United States | 2–2 | MLS · United States |
| 2016-06-02 | Portland TimbersvSan Jose EarthquakesMLS · United States | 1–0 | MLS · United States |
| 2016-05-29 | San Jose EarthquakesvFC DallasMLS · United States | 0–0 | MLS · United States |
| 2016-05-23 | Los Angeles GalaxyvSan Jose EarthquakesMLS · United States | 1–1 | MLS · United States |
| 2016-05-12 | San Jose EarthquakesvHouston DynamoMLS · United States | 3–1 | MLS · United States |
| 2016-05-08 | Seattle SoundersvSan Jose EarthquakesMLS · United States | 2–0 | MLS · United States |
| 2016-04-30 | Philadelphia UnionvSan Jose EarthquakesMLS · United States | 1–1 | MLS · United States |
| 2016-04-24 | San Jose EarthquakesvSporting Kansas CityMLS · United States | 1–0 | MLS · United States |
| 2016-04-17 | Portland TimbersvSan Jose EarthquakesMLS · United States | 3–1 | MLS · United States |
| 2016-04-14 | San Jose EarthquakesvNew York Red BullsMLS · United States | 2–0 | MLS · United States |
| 2016-04-10 | FC DallasvSan Jose EarthquakesMLS · United States | 2–2 | MLS · United States |
| 2016-04-03 | San Jose EarthquakesvDC UnitedMLS · United States | 1–1 | MLS · United States |
| 2016-03-20 | Los Angeles GalaxyvSan Jose EarthquakesMLS · United States | 3–1 | MLS · United States |
| 2016-03-13 | San Jose EarthquakesvPortland TimbersMLS · United States | 2–1 | MLS · United States |
| 2016-03-06 | San Jose EarthquakesvColorado RapidsMLS · United States | 1–0 | MLS · United States |