| 2016-12-31 | Newport CountyvExeterLeague Two · England | 1–4 | League Two · England |
| 2016-12-26 | YeovilvExeterLeague Two · England | 0–0 | League Two · England |
| 2016-12-17 | ExetervMansfieldLeague Two · England | 2–0 | League Two · England |
| 2016-12-10 | CheltenhamvExeterLeague Two · England | 1–3 | League Two · England |
| 2016-11-26 | ExetervLutonLeague Two · England | 0–0 | League Two · England |
| 2016-11-22 | Leyton OrientvExeterLeague Two · England | 0–1 | League Two · England |
| 2016-11-19 | CarlislevExeterLeague Two · England | 3–2 | League Two · England |
| 2016-11-12 | ExetervDoncasterLeague Two · England | 1–3 | League Two · England |
| 2016-10-29 | MorecambevExeterLeague Two · England | 0–3 | League Two · England |
| 2016-10-22 | ExetervCambridgeLeague Two · England | 1–2 | League Two · England |
| 2016-10-15 | BarnetvExeterLeague Two · England | 1–4 | League Two · England |
| 2016-10-08 | ExetervGrimsbyLeague Two · England | 0–0 | League Two · England |
| 2016-10-01 | WycombevExeterLeague Two · England | 1–0 | League Two · England |
| 2016-09-27 | ExetervNotts CountyLeague Two · England | 0–2 | League Two · England |
| 2016-09-24 | StevenagevExeterLeague Two · England | 0–2 | League Two · England |
| 2016-09-17 | ExetervPlymouthLeague Two · England | 0–2 | League Two · England |
| 2016-09-10 | CrewevExeterLeague Two · England | 2–0 | League Two · England |
| 2016-09-03 | ColchestervExeterLeague Two · England | 2–3 | League Two · England |
| 2016-08-27 | ExetervPortsmouthLeague Two · England | 0–1 | League Two · England |
| 2016-08-20 | AccringtonvExeterLeague Two · England | 1–2 | League Two · England |
| 2016-08-16 | ExetervCrawley TownLeague Two · England | 0–1 | League Two · England |
| 2016-08-13 | ExetervHartlepoolLeague Two · England | 1–2 | League Two · England |
| 2016-08-06 | BlackpoolvExeterLeague Two · England | 2–0 | League Two · England |
| 2016-05-07 | LutonvExeterLeague Two · England | 4–1 | League Two · England |
| 2016-04-30 | ExetervMorecambeLeague Two · England | 1–1 | League Two · England |
| 2016-04-23 | Bristol RvsvExeterLeague Two · England | 3–1 | League Two · England |
| 2016-04-19 | ExetervMansfieldLeague Two · England | 2–3 | League Two · England |
| 2016-04-16 | ExetervNorthamptonLeague Two · England | 0–0 | League Two · England |
| 2016-04-09 | YeovilvExeterLeague Two · England | 0–2 | League Two · England |
| 2016-04-02 | ExetervPlymouthLeague Two · England | 2–1 | League Two · England |
| 2016-03-28 | Crawley TownvExeterLeague Two · England | 0–2 | League Two · England |
| 2016-03-25 | ExetervBarnetLeague Two · England | 1–1 | League Two · England |
| 2016-03-19 | Notts CountyvExeterLeague Two · England | 1–4 | League Two · England |
| 2016-03-12 | ExetervCarlisleLeague Two · England | 2–2 | League Two · England |
| 2016-03-05 | CambridgevExeterLeague Two · England | 0–1 | League Two · England |
| 2016-03-01 | ExetervPortsmouthLeague Two · England | 1–1 | League Two · England |
| 2016-02-27 | StevenagevExeterLeague Two · England | 0–2 | League Two · England |
| 2016-02-23 | ExetervOxfordLeague Two · England | 1–4 | League Two · England |
| 2016-02-20 | ExetervNewport CountyLeague Two · England | 1–1 | League Two · England |
| 2016-02-16 | YorkvExeterLeague Two · England | 2–0 | League Two · England |
| 2016-02-13 | WycombevExeterLeague Two · England | 1–0 | League Two · England |
| 2016-01-30 | HartlepoolvExeterLeague Two · England | 0–2 | League Two · England |
| 2016-01-23 | ExetervAccringtonLeague Two · England | 2–1 | League Two · England |
| 2016-01-16 | Leyton OrientvExeterLeague Two · England | 1–3 | League Two · England |
| 2016-01-12 | MorecambevExeterLeague Two · England | 1–1 | League Two · England |
| 2016-01-02 | ExetervDag and RedLeague Two · England | 1–2 | League Two · England |