| 2006-05-06 | SouthendvBristol CityLeague One · England | 1–0 | League One · England |
| 2006-04-29 | SwanseavSouthendLeague One · England | 2–2 | League One · England |
| 2006-04-22 | SouthendvDoncasterLeague One · England | 0–1 | League One · England |
| 2006-04-17 | BarnsleyvSouthendLeague One · England | 2–2 | League One · England |
| 2006-04-14 | SouthendvGillinghamLeague One · England | 0–1 | League One · England |
| 2006-04-08 | SouthendvBlackpoolLeague One · England | 2–1 | League One · England |
| 2006-04-01 | BournemouthvSouthendLeague One · England | 1–1 | League One · England |
| 2006-03-25 | SouthendvHartlepoolLeague One · England | 3–0 | League One · England |
| 2006-03-18 | Milton Keynes DonsvSouthendLeague One · England | 2–1 | League One · England |
| 2006-03-10 | SouthendvScunthorpeLeague One · England | 3–0 | League One · England |
| 2006-03-04 | ColchestervSouthendLeague One · England | 0–3 | League One · England |
| 2006-02-25 | SouthendvWalsallLeague One · England | 0–0 | League One · England |
| 2006-02-18 | ChesterfieldvSouthendLeague One · England | 3–4 | League One · England |
| 2006-02-14 | BrentfordvSouthendLeague One · England | 2–0 | League One · England |
| 2006-02-10 | SouthendvRotherhamLeague One · England | 2–0 | League One · England |
| 2006-02-04 | YeovilvSouthendLeague One · England | 0–2 | League One · England |
| 2006-01-27 | SouthendvSwindonLeague One · England | 2–0 | League One · England |
| 2006-01-21 | TranmerevSouthendLeague One · England | 0–0 | League One · England |
| 2006-01-14 | SouthendvBrentfordLeague One · England | 4–1 | League One · England |
| 2006-01-07 | OldhamvSouthendLeague One · England | 0–0 | League One · England |
| 2006-01-02 | BlackpoolvSouthendLeague One · England | 1–2 | League One · England |